Zainabadi, K. Malaria Parasite CLAG3, a Protein Linked to Nutrient Channels, Participates in High Molecular Weight Membrane-Associated Complexes in the...
PSM Score Distribution
Figure 2(a) and 2(b) show the peptide psm score distribution of PSMs. When FDR estimation is enabled in PEAKS Search...
Experiment Control
Figures 4(a) and 4(b) shows precursor mass error of PSMs in filtered result. They help examine whether the mass spectrometer...
De Novo Result Validation
Figure 3(a) and 3(b) provide a guideline for determining a proper ALC score threshold for filtering “de novo only” sequences....
False Discovery Rate (FDR) Curve
If Mascot is part of the inChorus, and the decoy validation is chosen in Mascot search, then Mascot’s FDR curve...
Venn Diagram/Table
When the inChorus result contains no more than three engines, a Venn diagram will be displayed. A Venn diagram shows...
Peptide ALC Score Scatter Plot
Figure 1(a) is a scatter plot showing de novo sequences’ ALC score versus precursor mass error in ppm. In a...
Feature Vector Ratio Distribution
Figures 3(a) and 3(b) plots the distribution of feature vector ratios by quality and by average area respectively. These plots...
High throughput sequencing of cyclic peptide immobilized on a gel-type single bead
Nokihara, K., et al. High throughput sequencing of cyclic peptide immobilized on a gel-type single bead. Amino Acids. 08/06/2016.
Protein-based PTM Quantitative Analysis by LC-MS/MS with PEAKS (Application Note)
Shan, B. & He, L. Protein-based PTM Quantitative Analysis by LC-MS/MS with PEAKS (Application Note) . ASMS. (Application Note). 05/06/2016.