PEAKS Workshop @ Columbia University

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On 2023-11-152024-12-02By In Workshop

Join us November 28th and 29th for comprehensive workshop on how to use PEAKS for both DDA and DIA data analysis. We will focus on the logic behind the algorithms in PEAKS and highlight the main workflows in PEAKS. Regardless, if your work focuses on discovery proteomics, immunopeptidomics, or glycoprotoemics, this workshop will increase your overall understanding of PEAKS and accelerate your knowledge on how to best use the software for your work.

We will provide coffee/tea and lunch on each day, and we hope to see you at Columbia University. Please register for all sessions or select the sessions that are more important to you.

Register

Columbia University, Morningside Campus
Room 700
Sherman Fairchild Center
1212 Amsterdam Ave, New York, NY 10027
United States

Workshop Training Sessions

Day 1: November 28, 2023

TimeTopicDescription
9:00 amDDA Workflow with PEAKSWe will focus on how PEAKS protein identification integrates database search with de novo sequencing for peptide identification.
10:00 amQuestion Period 
10:30 amDIA Workflow with PEAKSWe will focus on PEAKS Streamlined DIA workflow with Spectral Library Search, Database Search, and de novo sequencing.
11:30 amQuestion Period 
12:00 pmLunch 
1:00 pmPTM Analysis with PEAKSWe will focus on the capabilities of PEAKS PTM and how the new PEAKS PTM algorithm provides an accurate and sensitive workflow for finding confident PTMs.
2:00 pmQuestion Period 
2:30 pmPEAKS Q: LFQWe will focus on label free quantification workflow in PEAKS for both DDA and DIA.  
3:30 pmQuestion Period 
4:00 pmEnd of workshop 

Day 2: November 29, 2023

TimeTopicDescription
9:00 amPEAKS Q: Labelled QuantificationWe will focus on TMT and SILAC labelled quantification workflows in PEAKS.
10:00 amQuestion Period 
10:30 amIntroduction to PEAKS GlycanFinderOverview of our new comprehensive software for in-depth glycoproteomic analysis with glycan structural resolution.
11:30 amQuestion Period 
12:00 pmLunch 
1:00 pmDeepNovo PeptidomeWe will focus on how our DeepNovo Peptidome analysis integrates de novo sequencing, database search, and homology search in one workflow for immunopeptidomics.
2:00 pmQuestion Period 
2:30 pmOverview of PEAKS AB 3.0Overview of our latest version of protein de novo sequencing and glycan profiling software.
3:30 pmQuestion Period 
4:00 pmEnd of workshop 

Registration

Missed the webinar? Watch the presentation and more tutorial videos here.

Questions? Email us at training@bioinfor.com.