Today, Bioinformatics Solutions Inc. (BSI) is proud to release the new PEAKS Online as part of the new PEAKS 12. PEAKS Online is designed for high-throughput proteomics and is powered by high-performance computing and deep learning-enabled proteomics solutions to support large-scale DDA and DIA proteomics research.

In PEAKS Online 12, we have furthered the deep learning revolution in PEAKS and integrated AI to advance peptide de novo sequencing, PEAKS DIA Workflow, PEAKS DB, and DeepNovo Peptidome for immunopeptidomics.

Ascend to new heights with PEAKS 12 and see how the solutions from BSI can advance your discovery proteomics data analysis. Contact us today for a free trial and see how PEAKS Online 12 can accelerate your discovery proteomics research!

PEAKS Online 12

The next generation of PEAKS Online is enhanced with upgraded DIA workflows, de novo sequencing and immunopeptidomic analysis.

• Improved DeepNovo sequencing with FDR control (Mao et al., 2023, Tran et al., 2024).
• DIA workflow (Spectral Library Search + directDB + de novo).​
  • Enhanced sensitivity and accuracy for direct database searches.​
  • Enhanced Deep learning-based technology for predicting spectra, retention time, and collision cross-section values.​
• DeepNovo-based peptidome workflow for immunopeptidomics: integrated canonical and non-canonical database searches, homology search, and DeepNovo for improved HLA peptidomics with FDR control.​
  • DeepNovo-DIA peptidome for DIA immunpeptidomic data.
  • Add label-free quantification and/or automated Quality Control analysis to DeepNovo Peptidome workflow.
• De novo assisted database search with a deep learning-boost to maximise peptide ID efficiency.​
• Post-translational modification (PTM) and Mutations analysis with next level confidence. Confidently identify PTM/mutation sites based on amino acid level evidence.

Visit PEAKS 12 for more details about these new features in PEAKS Online and request a free trial today.